FSL Change File Type (fslchfiletype)¶
Library: FSL | Docker Image: brainlife/fsl
Function¶
Converts neuroimaging files between NIfTI and ANALYZE file formats.
Modality: Any NIfTI or ANALYZE image.
Typical Use: Converting between compressed and uncompressed NIfTI formats, or to legacy ANALYZE format.
Key Parameters¶
Key Points¶
Supports NIFTI_GZ (.nii.gz), NIFTI (.nii), NIFTI_PAIR (.hdr/.img), and ANALYZE formats. Quick utility for format interoperability.
Inputs¶
| Name | Type | Required | Label | Flag |
|---|---|---|---|---|
filetype |
enum |
Yes | Output file type | |
input |
File |
Yes | Input image file | |
output |
string |
No | Output filename (default overwrites input) |
Accepted Input Extensions¶
- input_file:
.nii,.nii.gz,.hdr,.img
Outputs¶
| Name | Type | Glob Pattern |
|---|---|---|
converted_file |
File[] |
*.nii.gz, *.nii, *.hdr, *.img |
log |
File |
fslchfiletype.log |
Output Extensions¶
- output:
.nii,.nii.gz,.hdr,.img
Docker Tags¶
Available versions: latest, 6.0.4-patched2, 6.0.4-patched, 6.0.4, 6.0.4-xenial, 5.0.11, 6.0.0, 6.0.1, 5.0.9
Categories¶
- Utilities > FSL > Volume Operations