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ANTs Image Math Operations

Library: ANTs | Docker Image: antsx/ants

Function

Versatile tool for image arithmetic, morphological operations, distance transforms, and various measurements.

Modality: 3D NIfTI volume(s).

Typical Use: Mathematical operations, morphological operations, connected component analysis.

Key Parameters

[input2] [parameters]

Key Points

Operations include: m (multiply), + (add), ME/MD (erode/dilate), GetLargestComponent, FillHoles, Normalize.

Inputs

Name Type Required Label Flag
dimensionality int Yes Image dimensionality (2, 3, or 4)
output_image string Yes Output image filename
operation string Yes Operation to perform (m, +, -, /, G, MD, ME, MO, MC, etc.)
input_image File Yes First input image
second_input File No Second input image for binary operations
scalar_value double No Scalar value for operations (alternative to second image)

Accepted Input Extensions

  • input_image: .nii, .nii.gz
  • second_input: .nii, .nii.gz

Outputs

Name Type Glob Pattern
output File $(inputs.output_image)
log File ImageMath.log

Output Extensions

  • output: .nii, .nii.gz

Docker Tags

Available versions: latest, master, v2.6.5, 2.6.5, v2.6.4, 2.6.4, v2.6.3, 2.6.3, v2.6.2, 2.6.2 and 5 more

Categories

  • Utilities > ANTs > Image Operations

Documentation

Official Documentation